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Publications

Data scientist analysing information

Browse a collection of academic publications and research papers, contributed to by personnel from the Unit.

Automated download and clean-up of family-specific databases for kmer-based virus identification.
Allesøe, RL; Lemvigh, CK; PHAN, MV T; Clausen, PT L C; Florensa, AF; Koopmans, MP G; Lund, O; COTTEN, M;
2020
Bioinformatics (Oxford, England), (2020).37 5 10.1093/bioinformatics/btaa857.
Strengthening integration of chronic care in Africa: protocol for the qualitative process evaluation of integrated HIV, diabetes and hypertension care in a cluster randomised controlled trial in Tanzania and Uganda.
Van Hout, M-C; Bachmann, M; Lazarus, JV; Shayo, EH; Bukenya, D; Picchio, CA; NYIRENDA, M; Mfinanga, SG; BIRUNGI, J; Okebe, J; Jaffar, S;
2020
BMJ open, (2020).10 10 10.1136/bmjopen-2020-039237.
Effect of intensive versus standard anthelminthic treatment on growth and cognition among children living in a high Schistosoma mansoni transmission setting - Supporting Information.
Nampijja, M; Lubyayi, L; Tumusiime, J; Nabulime, J; Kizindo, R; Kabuubi, P; Sanya, RE; Kabagenyi, J; Akurut, H; Muhangi, L; WEBB, EL; Alcock, K; ELLIOTT, AM; LaVIISWA Trial Team,;
2020
, London School of Hygiene & Tropical Medicine (London, United Kingdom) (2020). 10.17037/DATA.00001895.
Access to primary healthcare during lockdown measures for COVID-19 in rural South Africa: an interrupted time series analysis.
Siedner, MJ; Kraemer, JD; Meyer, MJ; Harling, G; Mngomezulu, T; Gabela, P; Dlamini, S; Gareta, D; Majozi, N; Ngwenya, N; SEELEY, J; Wong, E; Iwuji, C; Shahmanesh, M; Hanekom, W; Herbst, K;
2020
BMJ OPEN, (2020).10 10 10.1136/bmjopen-2020-043763.
Understanding hard-to-reach communities: local perspectives and experiences of trachoma control among the pastoralist Maasai in northern Tanzania.
MTUY, TB; Bardosh, K; Ngondi, J; Mwingira, U; SEELEY, J; BURTON, M; LEES, S;
2020
Journal of Biosocial Science, (2020).53 6 10.1017/S0021932020000553.
HIV Stigma and Viral Suppression Among People Living With HIV in the Context of Universal Test and Treat: Analysis of Data From the HPTN 071 (PopART) Trial in Zambia and South Africa.
HARGREAVES, JR; PLIAKAS, T; Hoddinott, G; MAINGA, T; Mubekapi-Musadaidzwa, C; Donnell, D; Piwowar-Manning, E; Agyei, Y; Mandla, NF; Dunbar, R; MACLEOD, D; FLOYD, S; Bock, P; Fidler, S; HAYES, RJ; SEELEY, J; Stangl, A; BOND, V; AYLES, H; HPTN 071 (PopART) Study Team,;
2020
Journal of acquired immune deficiency syndromes (1999), (2020).85 5 10.1097/QAI.0000000000002504.
A randomised feasibility trial of an intervention to support sharing of HIV status for 18-25-year olds living with perinatally acquired HIV compared with standard care: HIV Empowering Adults' Decisions to Share-UK/Uganda Project (HEADS-UP).
Evangeli, M; Foster, C; Musiime, V; Fidler, S; SEELEY, J; Gnan, G;
2020
Pilot and Feasibility Studies, (2020).6 1 10.1186/s40814-020-00688-w.
Test but not treat: Community members' experiences with barriers and facilitators to universal antiretroviral therapy uptake in rural KwaZulu-Natal, South Africa.
Iwuji, C; Chimukuche, RS; Zuma, T; Plazy, M; Larmarange, J; Orne-Gliemann, J; Siedner, M; Shahmanesh, M; SEELEY, J;
2020
PLOS ONE, (2020).15 9 10.1371/journal.pone.0239513.
Entamoeba and Giardia parasites implicated as hosts of CRESS viruses.
Kinsella, CM; Bart, A; Deijs, M; Broekhuizen, P; Kaczorowska, J; Jebbink, MF; Van Gool, T; COTTEN, M; Van der Hoek, L;
2020
Nature communications, (2020).11 1 10.1038/s41467-020-18474-w.
"They have this not care - don't care attitude:" A Mixed Methods Study Evaluating Community Readiness for Oral PrEP in Adolescent Girls and Young Women in a Rural Area of South Africa.
Nakasone, SE; Chimbindi, N; Mthiyane, N; Nkosi, B; Zuma, T; BAISLEY, K; Dreyer, J; Pillay, D; FLOYD, S; BIRDTHISTLE, I; SEELEY, J; Shahmanesh, M;
2020
AIDS research and therapy, (2020).17 1 10.1186/s12981-020-00310-2.