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Publications

Data scientist analysing information

Browse a collection of academic publications and research papers, contributed to by personnel from the Unit.

The utility of integrating nanopore sequencing into routine HIV-1 drug resistance surveillance.
LULE, DB; Ssemwanga, D; KALEEBU, P; TULLY, DC;
2025
Microbial genomics, (2025).11 3 10.1099/mgen.0.001375.
Community perspectives on the risks of prescription drug misuse and awareness among young women and girls in KwaZulu-Natal, South Africa [version 1; peer review: awaiting peer review].
Chimukuche, RS; SEELEY, J;
2025
F1000Research, (2025).14, 10.12688/f1000research.164539.1.
Bridging genomics' greatest challenge: The diversity gap.
Corpas, M; Pius, M; Poburennaya, M; Guio, H; Dwek, M; Nagaraj, S; Lopez-Correa, C; Popejoy, A; FATUMO, S;
2025
Cell Genomics, (2025).5 1(1), Art.No. 100724, 100724-100724. 10.1016/j.xgen.2024.100724.
EDTA tubes are suitable for insulin and C-peptide measurement in resource-limited settings and can be stored at room temperature for up to 24 hours.
Mubiru, N; Mukasa, R; SEKITOLEKO, I; Balungi, PA; Kakumba, RM; Ongaria, T; Nkabura, H; NYIRENDA, M; Niwaha, AJ; Nakanga, WP;
2025
PLOS One, (2025).20 6 10.1371/journal.pone.0312065.
Seroprevalence of Cytomegalovirus Among Pregnant Women at Kawempe National Referral Hospital, Uganda: A Cross-sectional Study.
Katungye, RV; Musooko, M; Sekikubo, M; Mutabazi, T; Kyohere, M; Tusubira, V; Sendagala, JN; Peacock, J; Le Doare, K; Nakimuli, A; Djennad, A; Nyamaizi, A; Ssali, A; Amone, A; Wamawobe, A; Nakimuli, A; Farley, C; Nanyunja, C; Najuka, C; Komugisha, C; Shelley, DR; Portal, EA R; Duckworth, E; Karafillakis, E; O'Hara, G; ... Chalker, V.
2025
Open Forum Infectious Diseases, (2025).11 Supplement_3 10.1093/ofid/ofae604.
Safety and Immunogenicity of a Modified Self-Amplifying Ribonucleic Acid (saRNA) Vaccine Encoding SARS-CoV-2 Spike Glycoprotein in SARS-CoV-2 Seronegative and Seropositive Ugandan Individuals.
KITONSA, J; Serwanga, J; Cheeseman, HM; ABAASA, A; Lunkuse, JF; RUZAGIRA, E; Kato, L; Nambaziira, F; Oluka, GK; Gombe, B; Jackson, S; Ssebwana, JK; McFarlane, LR; Joseph, S; Pierce, BF; Shattock, RJ; KALEEBU, P;
2025
Vaccines, (2025).13 6 10.3390/vaccines13060553.
Evaluating adherence in an active-controlled HIV pre-exposure prophylaxis trial (PrEPVacc) to inform the estimation of HIV incidence in a counterfactual placebo arm.
KANSIIME, S; Holm Hansen, C; Bern, H; Fox, J; Dunn, D; RUZAGIRA, E; HAYES, R; Mc Cormack, S; Gray, G; Singh, N; Gaffoor, Z; Morar, N; Sithole, T; Woeber, K; Siva, S; Hwengwere, E-N; Chidawanyika, RS; Mahapa, N; Khanyile, P; Seeley, J; Maganga, L; William, W; Kapesa, E; Danstan, E; Pamba, D; ... Gumbe, A.
2025
HIV Research & Clinical Practice, (2025).26 1 10.1080/25787489.2025.2513684.
Data supporting "Temporal trends of SARS-CoV-2 exposure in adolescents: a longitudinal pilot study nested in a Uganda birth cohort".
ZIRIMENYA, L; Natukunda, A; Nassuna, J; NKURUNUNGI, G; ELLIOTT, AM; WEBB, E;
2025
, London School of Hygiene & Tropical Medicine (London, United Kingdom) (2025). 10.17037/DATA.00004678.
SPIRIT Checklist for: Efficacy and safety of long acting injectable cabotegravir and rilpivirine in improving HIV-1 control in Sub Saharan Africa: Protocol for a phase 3b open label randomized controlled trial (IMPALA).
Tumusiime, V; RUZAGIRA, E; Norcross, C; Eshun-Wilsonova, I; Kitonsa, J; Bahemuka, UM; GRINT, D; Kimbugwe, G; Kakande, A; LAWRENCE, DS; Mwendia, F; Van Solinge, R; Van Eygen, V; Boateng, FA; CRESSWELL, F;
2025
, London School of Hygiene & Tropical Medicine (London, United Kingdom) (2025). 10.17037/DATA.00004492.
Experiences and self-care efforts among female sex workers in Nairobi, Kenya, during COVID-19.
Nyariki, E; Panneh, M; Wanjiru, R; Shah, P; Pollock, J; Babu, H; Kungu, M; Beksinka, A; Liku, J; Kimani, J; SEELEY, J; BEATTIE, TS;
2025
Social Sciences & Humanities Open, (2025).11, 10.1016/j.ssaho.2025.101454.