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Publications

Data scientist analysing information

Browse a collection of academic publications and research papers, contributed to by personnel from the Unit.

Changes in social contacts in England during the COVID-19 pandemic between March 2020 and March 2021 as measured by the CoMix survey: A repeated cross-sectional study.
Gimma, A; MUNDAY, JD; WONG, KL M; Coletti, P; VAN ZANDVOORT, K; PREM, K; CMMID COVID-19 working group,; KLEPAC, P; Rubin, GJ; FUNK, S; EDMUNDS, WJ; JARVIS, CI;
2022
PLoS medicine, (2022).19 3 10.1371/journal.pmed.1003907.
Global, regional, and national consumption of animal-source foods between 1990 and 2018: findings from the Global Dietary Database.
Miller, V; Reedy, J; Cudhea, F; Zhang, J; Shi, P; Erndt-Marino, J; Coates, J; Micha, R; Webb, P; Mozaffarian, D; Global Dietary Database,;
2022
The Lancet. Planetary health, (2022).6 3 10.1016/s2542-5196(21)00352-1.
Alternative pre-analytic sample handling techniques for glucose measurement in the absence of fluoride tubes in low resource settings.
Nakanga, WP; Balungi, P; Niwaha, AJ; Shields, BM; Hughes, P; Andrews, RC; Mc Donald, TJ; NYIRENDA, MJ; Hattersley, AT;
2022
PloS One, (2022).17 2 10.1371/journal.pone.0264432.
Economic, social and demographic impacts of drought on treatment adherence among people living with HIV in rural South Africa: A qualitative analysis.
Orievulu, K; Ayeb-Karlsson, S; Ngwenya, N; Ngema, S; McGregor, H; Adeagbo, O; Siedner, MJ; Hanekom, W; Kniveton, D; SEELEY, J; Iwuji, C;
2022
Climate Risk Management, (2022).36, 10.1016/j.crm.2022.100423.
Exploring facilitators for a transition from alternative and complementary therapies to evidence-based treatments in Ugandan first-episode psychosis patients.
Mwesiga, E; SSEMATA, A; Nakitende, AJ; Ongeri, L; Semeere, A; Loewy, R; Meffert, S; Nakasujja, N;
2022
medRxiv (2022). 10.1101/2022.02.21.22270378.
First laboratory confirmation and sequencing of Zaire ebolavirus in Uganda following two independent introductions of cases from the 10th Ebola Outbreak in the Democratic Republic of the Congo, June 2019.
Nyakarahuka, L; Mulei, S; Whitmer, S; Jackson, K; Tumusiime, A; Schuh, A; Baluku, J; Joyce, A; Ocom, F; Tusiime, JB; Montgomery, JM; Balinandi, S; Lutwama, JJ; Klena, JD; Shoemaker, TR; ‘Kasese EVD Outbreak Response Team',;
2022
PLoS neglected tropical diseases, (2022).16 2 10.1371/journal.pntd.0010205.
PrEPVacc: A phase IIb three-arm, two-stage HIV prophylactic vaccine trial with a second randomization to compare TAF/FTC to TDF/FTC as pre-exposure prophylaxis.
RUZAGIRA, E;
2022
(2022).
Comparative assessment of methods for short-term forecasts of COVID-19 hospital admissions in England at the local level.
MEAKIN, S; ABBOTT, S; BOSSE, N; MUNDAY, J; GRUSON, H; Hellewell, J; SHERRATT, K; CMMID COVID-19 Working Group,; FUNK, S;
2022
BMC Medicine, (2022).20 1 10.1186/s12916-022-02271-x.
A comparison of four epidemic waves of COVID-19 in Malawi; an observational cohort study.
Anscombe, C; Lissauer, S; Thole, H; Rylance, J; Dula, D; Menyere, M; Kutambe, B; Van der Veer, C; Phiri, T; Banda, NP; Mndolo, KS; Mponda, K; Phiri, C; Mallewa, J; NYIRENDA, M; Katha, G; Mwandumba, H; Gordon, SB; Jambo, KC; Cornick, J; Feasey, N; Barnes, KG; Morton, B; Ashton, PM;
2022
openRxiv (2022). 10.1101/2022.02.17.22269742.
Publisher Correction: Characterising within-hospital SARS-CoV-2 transmission events using epidemiological and viral genomic data across two pandemic waves.
Lindsey, BB; Villabona-Arenas, CJ; Campbell, F; KEELEY, AJ; Parker, MD; Shah, DR; Parsons, H; Zhang, P; Kakkar, N; Gallis, M; Foulkes, BH; Wolverson, P; Louka, SF; Christou, S; State, A; Johnson, K; Raza, M; Hsu, S; JOMBART, T; Cori, A; Sheffield COVID-19 Genomics Group,; COVID-19 Genomics UK (COG-UK) consortium,; CMMID COVID-19 working group,; Evans, CM; Partridge, DG; ... De Silva, TI.
2022
NATURE COMMUNICATIONS, (2022).13 1 10.1038/s41467-022-28681-2.