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Publications

Data scientist analysing information

Browse a collection of academic publications and research papers, contributed to by personnel from the Unit.

Forced vaginal sex and genital immune correlates of HIV risk: a prospective study of female sex workers in Kenya.
Pollock, J; Kung'u, M; Udayakumar, S; Huibner, S; Kabuti, R; Babu, H; Irungu, E; Ngurukiri, P; Muthoga, P; Adhiambo, W; WEISS, HA; SEELEY, J; ABRAMSKY, T; Kimani, J; Beattie, TS; Kaul, R; Maisha Fiti Study Champions,;
2025
BMJ global health, (2025).10 12 10.1136/bmjgh-2024-018219.
Single genome amplification and molecular cloning of HIV-1 populations in acute HIV-1 infection: implications for studies on HIV-1 diversity and evolutionary rate.
Hsieh, AY Y; Hassan, AS; Nazziwa, J; Lindquist, L; Karlson, S; Hare, J; Kamali, A; Karita, E; Kilembe, W; Price, MA; Björkman, P; KALEEBU, P; Allen, S; Hunter, E; Gilmour, J; Rowland-Jones, SL; Sanders, EJ; Esbjörnsson, J;
2025
Virus evolution, (2025).12 1 10.1093/ve/veaf099.
Adherence to antiretroviral therapy among female sex workers in Kampala, Uganda.
Ssemakula, DM; BALINDA, SN; MAYANJA, Y; Kamacooko, O; ABAASA, A; SEELEY, J;
2025
Journal of public health in Africa, (2025).16 1 10.4102/jphia.v16i1.1376.
Temporal modulation of gene expression in a controlled Schistosoma mansoni human infection model.
Li, D; Jiang, C; Zhu, W; Houlder, EL; Stam, KA; Koopman, JP R; Langenberg, M; Kavishna, R; Torkzadeh, S; Andersson, B; Persson, J; Kalyanasundaram, A; Balkhi, MY; Kifle, DW; Arya, A; Jeon, HJ; Tadesse, BT; Gray, SA; Carter, D; ELLIOTT, AM; Marks, F; Harandi, AM; Roestenberg, M; Siddiqui, AA;
2025
Frontiers in immunology, (2025).16, 10.3389/fimmu.2025.1707749.
teamNGS Balances Sensitivity for Viruses with Comprehensive Microbial Detection in Clinical Specimens.
Yamaguchi, J; Orf, GS; Malinauskas, J; Mata, M; Weiss, SL; Forberg, K; Meyer, TV; Wiebe, PO; Mowerman, I; Piotrowski, SJ; Glownia, D; Rodgers, MA; Hackett, J; Suputtamongkol, Y; Phoompoung, P; Gomathi, S; Pradeep, A; Solomon, SS; BBOSA, N; KALEEBU, P; Ahouidi, AD; Mboup, S; Sequeira, AF; Tojo, A; Cloherty, GA; ... Berg, MG.
2025
Microorganisms, (2025).13 12 10.3390/microorganisms13122854.
Resilience and residuals beyond containment - The hidden burden of Bundibugyo Ebola virus survivorship sixteen years on: A cross-sectional observational study.
Kaweesa, RE; Katende, JS; Wayesu, RR; Ntabadde, AD; Opio, S; Kato, L; Oluka, GK; Nambi, R; Tumusiime, RA; FiloStudy Team,; KALEEBU, P; Lutwama, JJ; SERWANGA, J;
2025
New microbes and new infections, (2025).69, 10.1016/j.nmni.2025.101685.
Climate change policies and health in Uganda: where are we headed?.
Emoru, RD; Lancelot, LH L; Mbabazi, T; Ssemugabo, C; NYIRENDA, M;
2025
International health (2025). 10.1093/inthealth/ihaf143.
Understanding the mental health of adolescents and young adults in rural South Africa through participatory research.
Mthiyane, N; Zikhali, M; Xulu, S; Ngwenya, N; Sherr, L; Hunt, X; SEELEY, J; Copas, A; Harling, G; Shahmanesh, M; Zuma, T;
2025
PLOS global public health, (2025).5 12 10.1371/journal.pgph.0005344.
A study protocol to co-develop and evaluate interventions that strengthen healthcare resilience to extreme weather events in three African countries: the ASTRA study.
Mabuto, T; Orievulu, K; BOND, V; Simwinga, M; Grapsa, E; Khoza, T; Khan-Gillmore, S; Nzimande, L; Craig, M; Khagayi, S; Chirwa, T; Chiau, R; Ossemane, E; Hoffmann, C; SEELEY, J; Kniveton, D; Babashahi, S; Rangunwala, A; Mthembu, N; Oberholzer, C; Charalambous, S; Iwuji, C;
2025
Frontiers in Climate, (2025).7, 10.3389/fclim.2025.1679392.
Diagnostic Accuracy of Next-Generation Sequencing: Prevalence of HIV-1 Drug Resistance and Associated Factors Among Adults on Integrase Inhibitors with Virologic Failure.
Lunkuse, S; Kiiza, R; Ssekagiri, A; Nannyonjo, M; Ntenkaire, N; Nassolo, F; Namagembe, HS; Kiberu, F; Kabuuka, D; Andia, I; Kalyango, JN; Kibwika, PB; BBOSA, N; KALEEBU, P; Ssemwanga, D;
2025
Viruses, (2025).17 12 10.3390/v17121596.