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Publications

o2geosocial: Reconstructing who-infected-whom from routinely collected surveillance data.
Robert, A; FUNK, S; KUCHARSKI, AJ;
2021
F1000Research, (2021).10, 10.12688/f1000research.28073.1.
Implication of backward contact tracing in the presence of overdispersed transmission in COVID-19 outbreaks.
ENDO, A; Centre for the Mathematical Modelling of Infectiou,; LECLERC, QJ; KNIGHT, GM; MEDLEY, GF; ATKINS, KE; FUNK, S; KUCHARSKI, AJ;
2021
Wellcome Open Research, (2021).5, 10.12688/wellcomeopenres.16344.3.
o2geosocial: Reconstructing who-infected-whom from routinely collected surveillance data.
ROBERT, A; FUNK, S; KUCHARSKI, AJ;
2021
F1000Research, (2021).10, 10.12688/f1000research.28073.2.
<i>o2geosocial</i>: Reconstructing who-infected-whom from routinely collected surveillance data.
Robert, A; FUNK, S; Kucharski, AJ;
2021
F1000Research, (2021).10, 10.12688/f1000research.28073.2.
Estimating the minimum number of SARS-CoV-2 infected cases needed to detect viral RNA in wastewater: To what extent of the outbreak can surveillance of wastewater tell us?.
Hong, P-Y; Rachmadi, AT; Mantilla-Calderon, D; Alkahtani, M; Bashawri, YM; Al Qarni, H; O'REILLY, KM; Zhou, J;
2021
Environmental research, (2021).195, 10.1016/j.envres.2021.110748.
covidregionaldata: Subnational data for COVID-19 epidemiology.
Palmer, J; Sherratt, K; Martin-Nielsen, R; Bevan, J; Gibbs, H; CMMID COVID-19 Working Group,; FUNK, S; Abbott, S;
2021
, Zenodo (2021).
RISK11 signature scores for the biomarker-guided tuberculosis preventive therapy (CORTIS) randomised controlled trial.
Scriba, TJ; Fiore-Gartland, A; Penn-Nicholson, A; Mulenga, H; Kimbung Mbandi, S; Borate, B; Mendelsohn, SC; Hadley, K; Hikuam, C; Kaskar, M; Musvosvi, M; Bilek, N; Self, S; SUMNER, T; WHITE, RG; Erasmus, M; Jaxa, L; Raphela, R; Innes, C; Brumskine, W; Hiemstra, A; Malherbe, ST; Hassan-Moosa, R; Tameris, M; Walzl, G; ... Hatherill, M.
2021
, University of Cape Town (2021).
RISK11 signature scores for the biomarker-guided tuberculosis preventive therapy (CORTIS) randomised controlled trial.
Scriba, TJ; Fiore-Gartland, A; Penn-Nicholson, A; Mulenga, H; Kimbung Mbandi, S; Borate, B; Mendelsohn, SC; Hadley, K; Hikuam, C; Kaskar, M; Musvosvi, M; Bilek, N; Self, S; SUMNER, T; WHITE, RG; Erasmus, M; Jaxa, L; Raphela, R; Innes, C; Brumskine, W; Hiemstra, A; Malherbe, ST; Hassan-Moosa, R; Tameris, M; Walzl, G; ... Hatherill, M.
2021
, University of Cape Town (2021).
Importance of patient bed pathways and length of stay differences in predicting COVID-19 hospital bed occupancy in England.
LECLERC, QJ; FULLER, NM; KEOGH, RH; DIAZ-ORDAZ, K; Sekula, R; Semple, MG; ISARIC4C Investigators,; CMMID COVID-19 Working Group,; ATKINS, KE; PROCTER, SR; Knight, GM;
2021
BMC health services research, (2021).21 1 10.1186/s12913-021-06509-x.
cmmid/SA2UK.
PEARSON, CA B; RUSSELL, TW; KUCHARSKI, AJ;
2021
, Github (2021).