Publications

Browse a collection of academic publications and research papers, contributed to by personnel from the Unit.

Title

Author

Year

Application of genomics to investigate hospital outbreaks and inform infection control in asub- Saharan African setting.

OKOMO, U;

2022

(2022).

Vitamin D Deficiency and Its Association with Iron Deficiency in African Children.

Mogire, RM; Muriuki, JM; Morovat, A; Mentzer, AJ; WEBB, EL; Kimita, W; Ndungu, FM; Macharia, AW; Cutland, CL; Sirima, SB; Diarra, A; Tiono, AB; Lule, SA; Madhi, SA; PRENTICE, AM; Bejon, P; Pettifor, JM; ELLIOTT, AM; Adeyemo, A; Williams, TN; Atkinson, SH;

2022

NUTRIENTS, (2022).14 7 10.3390/nu14071372.

Climate change impacts and adaptation strategies for crops in West Africa: a systematic review.

CARR, TW; Mkuhlani, S; Segnon, AC; ALI, Z; Zougmoré, R; Dangour, AD; GREEN, R; SCHEELBEEK, P;

2022

Environmental research letters, (2022).17 5 10.1088/1748-9326/ac61c8.

Comparative Genomics of Disease and Carriage Serotype 1 Pneumococci.

Chaguza, C; Ebruke, C; Senghore, M; Lo, SW; Tientcheu, P-E; Gladstone, RA; Tonkin-Hill, G; Cornick, JE; Yang, M; Worwui, A; McGee, L; Breiman, RF; Klugman, KP; Kadioglu, A; Everett, DB; MACKENZIE, G; Croucher, NJ; ROCA, A; Kwambana-Adams, BA; ANTONIO, M; Bentley, SD;

2022

Genome biology and evolution, (2022).14 4 10.1093/gbe/evac052.

Implementing an antibiogram profile to aid rational antimicrobial therapy and improving infection prevention in an urban hospital in The Gambia; strategies and lessons for low income and middle-income countries.

DARBOE, S; Mirasol, R; Adejuyigbe, B; Muhammad, AK; NADJM, B; De St Maurice, A; Dogan, T; Ceesay, B; Umukoro, S; Okomo, U; Nwakanma, D; Roca, A; Secka, O; FORREST, K; Garner, O;

2022

medRxiv (2022). 10.1101/2022.04.19.22274009.

Protocol for the COG-UK hospital-onset COVID-19 infection (HOCI) multicentre interventional clinical study: evaluating the efficacy of rapid genome sequencing of SARS-CoV-2 in limiting the spread of COVID-19 in UK NHS hospitals.

Blackstone, J; Stirrup, O; Mapp, F; Panca, M; Copas, A; Flowers, P; Hockey, L; Price, J; Partridge, D; Peters, C; DE SILVA, T; Nebbia, G; Snell, LB; McComish, R; COVID-19 Genomics UK (COG-UK) Consortium,; Breuer, J;

2022

BMJ open, (2022).12 4 10.1136/bmjopen-2021-052514.

Averting wildlife-borne infectious disease epidemics requires a focus on socio-ecological drivers and a redesign of the global food system.

Wegner, GI; MURRAY, KA; SPRINGMANN, M; Muller, A; Sokolow, SH; Saylors, K; Morens, DM;

2022

eClinicalMedicine, (2022).47, 10.1016/j.eclinm.2022.101386.

Skin microbiome alters attractiveness to Anopheles mosquitoes.

SHOWERING, A; Martinez, J; Benavente, ED; Gezan, SA; JONES, RT; Oke, C; Tytheridge, S; PRETORIUS, E; Scott, D; Allen, RL; D'ALESSANDRO, U; Lindsay, SW; Armour, JA L; Pickett, J; LOGAN, JG;

2022

BMC microbiology, (2022).22 1 10.1186/s12866-022-02502-4.

Grassroots and Youth-Led Climate Solutions From The Gambia.

BONELL, A; Badjie, J; Jammeh, S; ALI, Z; Hydara, M; Davies, A; Faal, M; Ahmed, AN; Hand, W; PRENTICE, AM; MURRAY, KA; SCHEELBEEK, P;

2022

Frontiers in Public Health, (2022).10, 10.3389/fpubh.2022.784915.

A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV.

Ndlangisa, KM; Du Plessis, M; Lo, S; De Gouveia, L; Chaguza, C; ANTONIO, M; Kwambana-Adams, B; Cornick, J; Everett, DB; Dagan, R; Hawkins, PA; Beall, B; Corso, A; Grassi Almeida, SC; Ochoa, TJ; Obaro, S; Shakoor, S; Donkor, ES; Gladstone, RA; Ho, PL; Paragi, M; Doiphode, S; Srifuengfung, S; Ford, R; Moïsi, J; ... The Global Pneumococcal Sequencing Consortium,

2022

Microbial genomics, (2022).8 4 10.1099/mgen.0.000746.