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Publications

Changes in in-hospital mortality in the first wave of COVID-19: a multicentre prospective observational cohort study using the WHO Clinical Characterisation Protocol UK.
Docherty, AB; Mulholland, RH; Lone, NI; Cheyne, CP; De Angelis, D; DIAZ-ORDAZ, K; Donegan, C; Drake, TM; Dunning, J; FUNK, S; García-Fiñana, M; Girvan, M; Hardwick, HE; Harrison, J; Ho, A; Hughes, DM; KEOGH, RH; Kirwan, PD; Leeming, G; Nguyen Van-Tam, JS; Pius, R; Russell, CD; Spencer, RG; Tom, BD; Turtle, L; ... ISARIC4C Investigators,
2021
The Lancet. Respiratory medicine, (2021).9 7 10.1016/S2213-2600(21)00175-2.
Clinical coding of long COVID in English primary care: a federated analysis of 58 million patient records in situ using OpenSAFELY.
The OpenSAFELY Collaborative,; Walker, A; MacKenna, B; Inglesby, P; RENTSCH, C; Curtis, H; Morton, C; Morley, J; Mehrkar, A; Bacon, S; Hickman, G; Bates, C; Croker, R; Evans, D; Ward, T; Cockburn, J; Davy, S; BHASKARAN, K; SCHULTZE, A; Williamson, E; Hulme, W; MCDONALD, H; TOMLINSON, L; MATHUR, R; EGGO, R; ... GOLDACRE, B.
2021
medRxiv (2021). 10.1101/2021.05.06.21256755.
Impact of increased ventilation on indoor temperature and malaria mosquito density: an experimental study in The Gambia.
Jatta, E; Carrasco-Tenezaca, M; Jawara, M; BRADLEY, J; Ceesay, S; D'ALESSANDRO, U; JEFFRIES, D; Kandeh, B; Lee, DS-H; Pinder, M; Wilson, AL; Knudsen, J; Lindsay, SW;
2021
Journal of the Royal Society, Interface, (2021).18 178 10.1098/rsif.2020.1030.
KITmetricslab/covid19-forecast-hub-de.
Bracher, J; Wolffram, D; Deuschel, J; Görgen, K; Ketterer, JL; Ullrich, A; Abbott, S; Barbarossa, MV; Bertsimas, D; Bhatia, S; Bodych, M; BOSSE, NI; Burgard, JP; Castro, L; Fairchild, G; Fuhrmann, J; FUNK, S; Gogolewski, K; Gu, Q; Heyder, S; Hotz, T; Kheifetz, Y; Kirsten, H; Krueger, T; Krymova, E; ... Schienle, M.
2021
, Zenodo (2021).
Continent Summary Reproduction Number (R) Based on Reported Cases.
Abbott, S; Bennett, C; Hickson, J; Allen, J; Sherratt, K; FUNK, S;
2021
, Harvard Dataverse (2021).
Pre-vaccination testing could expand coverage of two-dose COVID vaccines.
PEARSON, CA B; CLIFFORD, S; Pulliam, JR C; EGGO, RM;
2021
Wellcome Open Research, (2021).6, 10.12688/wellcomeopenres.16835.1.
National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Belgium Based on Test Results.
Abbott, S; Bennett, C; Hickson, J; Allen, J; Sherratt, K; FUNK, S;
2021
, Harvard Dataverse (2021).
Factors associated with deaths due to COVID-19 versus other causes: population-based cohort analysis of UK primary care data and linked national death registrations within the OpenSAFELY platform.
BHASKARAN, K; Bacon, S; EVANS, SJ; Bates, CJ; RENTSCH, CT; MacKenna, B; TOMLINSON, L; Walker, AJ; SCHULTZE, A; Morton, CE; GRINT, D; Mehrkar, A; EGGO, RM; Inglesby, P; DOUGLAS, IJ; MCDONALD, HI; Cockburn, J; WILLIAMSON, EJ; Evans, D; Curtis, HJ; Hulme, WJ; Parry, J; Hester, F; Harper, S; Spiegelhalter, D; ... GOLDACRE, B.
2021
The Lancet regional health. Europe, (2021).6, 10.1016/j.lanepe.2021.100109.
Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2.
Vogels, CB F; Breban, MI; Ott, IM; Alpert, T; Petrone, ME; Watkins, AE; Kalinich, CC; Earnest, R; Rothman, JE; Goes de Jesus, J; Morales Claro, I; Magalhães Ferreira, G; Crispim, MA E; Brazil-UK CADDE Genomic Network,; Singh, L; Tegally, H; Anyaneji, UJ; Network for Genomic Surveillance in South Africa,; Hodcroft, EB; Mason, CE; Khullar, G; Metti, J; Dudley, JT; MacKay, MJ; Nash, M; ... Grubaugh, ND.
2021
PLoS biology, (2021).19 5 10.1371/journal.pbio.3001236.
Supplementary material from "Interventions targeting non-symptomatic cases can be important to prevent local outbreaks: SARS-CoV-2 as a case study".
Lovell-Read, FA; FUNK, S; Obolski, U; Donnelly, CA; Thompson, RN;
2021
, The Royal Society (2021).