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Publications

Tracking the emergence of disparities in the subnational spread of COVID-19 in Brazil using an online application for real-time data visualisation: A longitudinal analysis.
Mee, P; ALEXANDER, N; MAYAUD, P; González, FD J C; ABBOTT, S; Santos, AA D S; Acosta, AL; Parag, KV; Pereira, RH M; Prete, CA; Sabino, EC; Faria, NR; LSHTM Centre for Mathematical Modelling of Infecti,; BRADY, OJ;
2021
The Lancet Regional Health - Americas, (2021).5, 10.1016/j.lana.2021.100119.
The COVID-19 Schools Infection Survey in England: Protocol and participation profile for a prospective, observational cohort study (Preprint).
HALLIDAY, KE; NGUIPDOP-DJOMO, P; OSWALD, WE; STURGESS, J; ALLEN, E; SUNDARAM, N; Ireland, G; Poh, J; Ijaz, S; Shute, J; Diamond, I; Rourke, E; Dawe, F; Judd, A; CLARK, T; EDMUNDS, WJ; BONELL, C; MANGTANI, P; Ladhani, SN; LANGAN, SM; HARGREAVES, J;
2021
(2021). 10.2196/preprints.34075.
Replication Data for: Infection patterns of endemic human coronaviruses in rural households in coastal Kenya.
Nyaguthii, DM; Otieno, GP; Kombe, IK; Koech, D; Mutunga, M; MEDLEY, GF; Nokes, DJ; Munywoki, PK;
2021
, Harvard Dataverse (2021).
A Cluster-randomised, Non-inferiority Trial of the Impact of a Two-dose Compared to Three-dose Schedule of Pneumococcal Conjugate Vaccination in Rural Gambia: the PVS Trial.
MACKENZIE, GA; OSEI, I; Salaudeen, R; Hossain, I; Young, B; Secka, O; D'Alessandro, U; Palmu, A; Jokinen, J; Hinds, J; FLASCHE, S; Mulholland, K; Nguyen, C; GREENWOOD, B;
2021
(2021). 10.21203/rs.3.rs-917454/v1.
The COVID-19 Schools Infection Survey in England: Protocol and participation profile for a prospective, observational cohort study (Preprint).
HALLIDAY, KE; NGUIPDOP-DJOMO, P; OSWALD, WE; STURGESS, J; ALLEN, E; SUNDARAM, N; Ireland, G; Poh, J; Ijaz, S; Shute, J; Diamond, I; Rourke, E; Dawe, F; Judd, A; CLARK, T; EDMUNDS, WJ; BONELL, C; MANGTANI, P; Ladhani, SN; LANGAN, SM; HARGREAVES, J;
2021
JMIR Research Protocols (2021). 10.2196/34075.
How immunity from and interaction with seasonal coronaviruses can shape SARS-CoV-2 epidemiology.
WATERLOW, NR; VAN LEEUWEN, E; DAVIES, NG; CMMID COVID-19 Working Group,; FLASCHE, S; EGGO, RM;
2021
Proceedings of the National Academy of Sciences of the United States of America, (2021).118 49 10.1073/pnas.2108395118.
Comparing human and model-based forecasts of COVID-19 in Germany and Poland.
BOSSE, NI; ABBOTT, S; Bracher, J; Hain, H; Quilty, BJ; JIT, M; Van Leeuwen, E; Cori, A; FUNK, S;
2021
(2021). 10.1101/2021.12.01.21266598.
Estimating the increase in reproduction number associated with the Delta variant using local area dynamics in England.
ABBOTT, S; CMMID COVID-19 Working Group,; KUCHARSKI, A; FUNK, S;
2021
medRxiv (2021). 10.1101/2021.11.30.21267056.
Inference is bliss: simulation for power estimation of a cholera outbreak intervention study.
RATNAYAKE, R; CHECCHI, F; JARVIS, CI; EDMUNDS, J; Finger, F;
2021
(2021).
Precautionary breaks: Planned, limited duration circuit breaks to control the prevalence of SARS-CoV2 and the burden of COVID-19 disease.
Keeling, MJ; Guyver-Fletcher, G; Dyson, L; Tildesley, MJ; Hill, EM; MEDLEY, GF;
2021
EPIDEMICS, (2021).37, 10.1016/j.epidem.2021.100526.