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Publications

Probabilistic reconstruction of measles transmission clusters from routinely collected surveillance data.
ROBERT, A; KUCHARSKI, AJ; Gastañaduy, PA; Paul, P; FUNK, S;
2020
Journal of the Royal Society, Interface, (2020).17 168 10.1098/rsif.2020.0084.
Bacterial and host determinants of cough aerosol culture positivity in patients with drug-resistant versus drug-susceptible tuberculosis.
Theron, G; Limberis, J; Venter, R; Smith, L; Pietersen, E; Esmail, A; Calligaro, G; Te Riele, J; De Kock, M; Van Helden, P; Gumbo, T; CLARK, TG; Fennelly, K; Warren, R; DHEDA, K;
2020
NATURE MEDICINE, (2020).26 9 10.1038/s41591-020-0940-2.
A Modelling Study for Designing a Multi-layered Surveillance Approach to Detect the Potential Resurgence of SARS-CoV-2.
LIU, Y; Gong, W; CLIFFORD, S; Sundaram, M; CMMID-COVID19 Working Group,; JIT, M; FLASCHE, S; KLEPAC, P;
2020
medRxiv (2020). 10.1101/2020.06.27.20141440.
Feasibility of informing syndrome-level empiric antibiotic recommendations using publicly available antibiotic resistance datasets.
LECLERC, QJ; NAYLOR, NR; AIKEN, AM; COLL, F; KNIGHT, GM;
2020
Wellcome Open Research, (2020).4 140 10.12688/wellcomeopenres.15477.2.
Seasonal Influenza Vaccination During Pregnancy and the Risk of Major Congenital Malformations in Live-born Infants: A 2010-2016 Historical Cohort Study.
Peppa, M; Thomas, SL; MINASSIAN, C; WALKER, JL; MCDONALD, HI; Andrews, NJ; Kempley, ST; MANGTANI, P;
2020
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, (2020).73 11 10.1093/cid/ciaa845.
Tailoring Immunization Programmes: using patient file data to explore vaccination uptake and associated factors.
Musa, S; Bach Habersaat, K; Jackson, C; Kulo, A; Primorac, E; Smjecanin, M; FUNK, S;
2020
HUMAN VACCINES & IMMUNOTHERAPEUTICS, (2020).17 1 10.1080/21645515.2020.1769396.
The impact of maternal RSV vaccine to protect infants in Gavi-supported countries: Estimates from two models.
Baral, R; Li, X; Willem, L; Antillon, M; Vilajeliu, A; JIT, M; Beutels, P; Pecenka, C;
2020
VACCINE, (2020).38 33 10.1016/j.vaccine.2020.06.036.
Practical considerations for measuring the effective reproductive number, R t.
Gostic, KM; McGough, L; Baskerville, EB; ABBOTT, S; Joshi, K; Tedijanto, C; Kahn, R; Niehus, R; Hay, J; De Salazar, PM; HELLEWELL, J; MEAKIN, S; MUNDAY, J; BOSSE, NI; Sherrat, K; THOMPSON, RN; White, LF; Huisman, JS; Scire, J; Bonhoeffer, S; Stadler, T; Wallinga, J; FUNK, S; Lipsitch, M; Cobey, S;
2020
medRxiv preprint (2020). 10.1101/2020.06.18.20134858.
Use of seasonal influenza and pneumococcal polysaccharide vaccines in older adults to reduce COVID-19 mortality.
THINDWA, D; Garcia Quesada, M; LIU, Y; Bennett, J; Cohen, C; Knoll, MD; Von Gottberg, A; Hayford, K; FLASCHE, S;
2020
VACCINE, (2020).38 34 10.1016/j.vaccine.2020.06.047.
Spatial regression and spillover effects in cluster randomized trials with count outcomes.
Anaya-Izquierdo, K; ALEXANDER, N;
2020
BIOMETRICS, (2020).77 2 10.1111/biom.13316.