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Publications

Mortality attributable to third-generation cephalosporin resistance in Gram-negative bloodstream infections in African hospitals: a multi-site retrospective study.
Dramowski, A; Ong'ayo, G; REHMAN, AM; Whitelaw, A; Labi, A-K; Obeng-Nkrumah, N; Ndir, A; Magwenzi, MT; Onyedibe, K; Wolkewitz, M; De Kraker, ME A; SCOTT, JA G; AIKEN, AM; MBIRA study collaborators,;
2020
JAC-Antimicrobial Resistance, (2020).3 1 10.1093/jacamr/dlaa130.
A molecular barcode to inform the geographical origin and transmission dynamics of Plasmodium vivax malaria.
DIEZ BENAVENTE, E; Campos, M; PHELAN, J; NOLDER, D; Dombrowski, JG; Marinho, CR F; Sriprawat, K; Taylor, AR; Watson, J; ROPER, C; Nosten, F; SUTHERLAND, CJ; CAMPINO, S; CLARK, TG;
2020
PLoS genetics, (2020).16 2 10.1371/journal.pgen.1008576.
Genomic and Phenotypic Analyses of Acinetobacter baumannii Isolates From Three Tertiary Care Hospitals in Thailand.
Loraine, J; Heinz, E; Soontarach, R; Blackwell, GA; STABLER, RA; Voravuthikunchai, SP; Srimanote, P; Kiratisin, P; Thomson, NR; Taylor, PW;
2020
FRONTIERS IN MICROBIOLOGY, (2020).11, 10.3389/fmicb.2020.00548.
Population-level emergence of bedaquiline and clofazimine resistance-associated variants among patients with drug-resistant tuberculosis in southern Africa: a phenotypic and phylogenetic analysis.
Nimmo, C; Millard, J; Van Dorp, L; Brien, K; Moodley, S; Wolf, A; GRANT, AD; Padayatchi, N; Pym, AS; Balloux, F; O'Donnell, M;
2020
The Lancet. Microbe, (2020).1 4 10.1016/S2666-5247(20)30031-8.
Using genomics to understand the origin and dispersion of multidrug and extensively drug resistant tuberculosis in Portugal.
Perdigão, J; Gomes, P; Miranda, A; Maltez, F; Machado, D; Silva, C; PHELAN, JE; Brum, L; CAMPINO, S; Couto, I; Viveiros, M; CLARK, TG; Portugal, I;
2020
Scientific reports, (2020).10 1 10.1038/s41598-020-59558-3.
Innovative strategies to fight antimicrobial resistance: crowdsourcing to expand medical training.
KPOKIRI, EE; Budak, JZ; Chang, CC; Ong, JJ; Mabilat, C; Peeling, RW; Van Duin, D; TUCKER, JD;
2020
F1000Research, (2020).9, 10.12688/f1000research.22291.1.
Ongoing challenges to understanding multidrug- and rifampicin-resistant tuberculosis in children versus adults.
MCQUAID, CF; Cohen, T; Dean, AS; HOUBEN, RM G J; KNIGHT, GM; Zignol, M; WHITE, RG;
2020
European Respiratory Journal, (2020).57 2 10.1183/13993003.02504-2020.
Population genomics of Klebsiella pneumoniae.
Wyres, KL; Lam, MM C; HOLT, KE;
2020
Nature reviews. Microbiology, (2020).18 6 10.1038/s41579-019-0315-1.
Variation in antibiotic prescription rates in febrile children presenting to emergency departments across Europe (MOFICHE): A multicentre observational study.
Hagedoorn, NN; Borensztajn, DM; Nijman, R; Balode, A; Von Both, U; Carrol, ED; Eleftheriou, I; Emonts, M; Van der Flier, M; De Groot, R; Herberg, J; Kohlmaier, B; Lim, E; Maconochie, I; Martinon-Torres, F; Nieboer, D; Pokorn, M; Strle, F; Tsolia, M; YEUNG, S; Zavadska, D; Zenz, W; Vermont, C; Levin, M; Moll, HA; ... PERFORM consortium,
2020
PLOS MEDICINE, (2020).17 8 10.1371/journal.pmed.1003208.
Whole-genome sequencing resolves a polyclonal outbreak by extended-spectrum beta-lactam and carbapenem-resistant Klebsiella pneumoniae in a Portuguese tertiary-care hospital.
Perdigão, J; Modesto, A; Pereira, AL; Neto, O; Matos, V; Godinho, A; PHELAN, J; Charleston, J; SPADAR, A; De Sessions, PF; HIBBERD, M; CAMPINO, S; Costa, A; Fernandes, F; Ferreira, F; Correia, AB; Gonçalves, L; CLARK, TG; Duarte, A;
2020
Microbial genomics, (2020).7 6 10.1099/mgen.0.000349.