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Publications

An open-access database to navigate Mycobacterium tuberculosis genetic diversity.
Wall, R; PHELAN, J;
2024
(2024).
ResMAP-a saturation mutagenesis platform enabling parallel profiling of target-specific resistance-conferring mutations in <i>Plasmodium</i>.
WALL, RJ; MacGowan, SA; Hallyburton, I; Syed, AJ; Ajay Castro, S; Dey, G; Milne, R; Patterson, S; PHELAN, J; Wiedemar, N; Wyllie, S;
2024
mBio, (2024).15 10 10.1128/mbio.01708-24.
Evaluating the relationship between ciprofloxacin prescription and non-susceptibility in Salmonella Typhi in Blantyre, Malawi: an observational study.
Ashton, PM; Chunga Chirambo, A; Meiring, JE; Patel, PD; Mbewe, M; Silungwe, N; Chizani, K; Banda, H; Heyderman, RS; DYSON, ZA; MacPherson, P; Henrion, MY R; STRATAA Study Group,; HOLT, KE; Gordon, MA;
2024
The Lancet. Microbe, (2024).5 3 10.1016/s2666-5247(23)00327-0.
Pilot study to evaluate the need and implementation of a multifaceted nurse-led antimicrobial stewardship intervention in residential aged care.
Jokanovic, N; Lee, SJ; Haines, T; Hilmer, SN; Jeon, Y-H; Travis, L; Ayton, D; Watson, E; Tsindos, T; Stewardson, AJ; Stuart, RL; Cheng, AC; Peel, TN; Peleg, AY; Peleg, A; Haines, T; Cheng, A; Peel, T; HOLT, K; Hilmer, S; Jeon, Y-H; Stewardson, A; Stuart, R; Lee, SJ; Wilson, D; ... Wisniewski, J.
2024
JAC-Antimicrobial Resistance, (2024).6 1 10.1093/jacamr/dlae016.
Vaccine value profile for Klebsiella pneumoniae.
Dangor, Z; Benson, N; Berkley, JA; Bielicki, J; Bijsma, MW; Broad, J; Buurman, ET; Cross, A; Duffy, EM; HOLT, KE; Iroh Tam, P-Y; JIT, M; Karampatsas, K; Katwere, M; Kwatra, G; Laxminarayan, R; Le Doare, K; Mboizi, R; Micoli, F; Moore, CE; Nakabembe, E; NAYLOR, NR; O'Brien, S; Olwagen, C; Reddy, D; ... Madhi, SA.
2024
Vaccine, (2024).42 19S1 10.1016/j.vaccine.2024.02.072.
Diversity, functional classification and genotyping of SHV β-lactamases in<i>Klebsiella pneumoniae</i>.
Tsang, K; Lam, MM C; Wick, R; Wyres, K; Bachman, M; Baker, S; Barry, K; Brisse, S; CAMPINO, S; Chiaverini, A; Cirillo, DM; CLARK, T; Corander, J; Corbella, M; Cornacchia, A; Cuénod, A; D'Alterio, N; Di Marco, F; Donado-Godoy, P; Egli, A; Farzana, R; Feil, E; Fostervold, A; Gorrie, C; Gütlin, Y; ... KlebNET AMR Genotype-Phenotype Group,
2024
bioRxiv (2024). 10.1101/2024.04.05.587953.
Genomic diversity and antimicrobial resistance in clinical Klebsiella pneumoniae isolates from tertiary hospitals in Southern Ghana.
Mills, RO; Dadzie, I; Le-Viet, T; Baker, DJ; Addy, HP K; Akwetey, SA; Donkoh, IE; Quansah, E; Semanshia, PS; Morgan, J; Mensah, A; Adade, NE; Ampah, EO; Owusu, E; Mwintige, P; Amoako, EO; SPADAR, A; HOLT, KE; FOSTER-NYARKO, E;
2024
The Journal of antimicrobial chemotherapy, (2024).79 7 10.1093/jac/dkae123.
The TyphiNET data visualisation dashboard: Unlocking<i>Salmonella</i>Typhi genomics data to support public health.
DYSON, Z; CERDEIRA, L; Sharma, V; CAREY, M; HOLT, K; Global Typhoid Genomics Consortium,;
2024
bioRxiv (2024). 10.1101/2024.06.03.595798.
Pathogen diversity and antimicrobial resistance transmission of Salmonella enterica serovars Typhi and Paratyphi A in Bangladesh, Nepal, and Malawi: a genomic epidemiological study.
DYSON, ZA; Ashton, PM; Khanam, F; Chunga Chirambo, A; Shakya, M; Meiring, JE; Tonks, S; Karkey, A; Msefula, C; Clemens, JD; Dunstan, SJ; Baker, S; Dougan, G; Pitzer, VE; Basnyat, B; Qadri, F; Heyderman, RS; Gordon, MA; Pollard, AJ; HOLT, KE; STRATAA Study Group,;
2024
The Lancet microbe, (2024).5 8 10.1016/S2666-5247(24)00047-8.
<i>In vivo</i> selection of carbapenem resistance during persistent <i>Klebsiella pneumoniae</i> sequence type 395 bloodstream infection due to OmpK36 deletion.
Strahilevitz, J; Motro, Y; Temper, V; Merezhko, D; Ayalon, O; Bar Moshe, Y; Lam, MM C; HOLT, KE; Moran-Gilad, J;
2024
Antimicrobial agents and chemotherapy, (2024).68 8 10.1128/aac.00663-24.