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Publications

Identification of Acinetobacter baumannii loci for capsular polysaccharide (KL) and lipooligosaccharide outer core (OCL) synthesis in genome assemblies using curated reference databases compatible with Kaptive.
Wyres, KL; Cahill, SM; HOLT, KE; Hall, RM; Kenyon, JJ;
2020
MICROBIAL GENOMICS, (2020).6 3 10.1099/mgen.0.000339.
Utility of broad-spectrum antibiotics for diagnosing pulmonary tuberculosis in adults: a systematic review and meta-analysis.
DIVALA, TH; FIELDING, KL; Kandulu, C; Nliwasa, M; Sloan, DJ; Gupta-Wright, A; CORBETT, EL;
2020
The Lancet. Infectious Diseases, (2020).20 9 10.1016/S1473-3099(20)30143-2.
How antibiotics are used in pig farming: a mixed-methods study of pig farmers, feed mills and veterinarians in Thailand.
LEKAGUL, A; Tangcharoensathien, V; MILLS, A; Rushton, J; YEUNG, S;
2020
BMJ global health, (2020).5 2 10.1136/bmjgh-2019-001918.
Genomic diversity of Escherichia coli isolates from backyard chickens and guinea fowl in the Gambia.
FOSTER-NYARKO, E; Alikhan, N-F; Ravi, A; Thomson, NM; JARJU, S; Kwambana-Adams, BA; Secka, A; O'Grady, J; ANTONIO, M; Pallen, MJ;
2020
, Cold Spring Harbor Laboratory (2020). 10.1101/2020.05.14.096289.
Quantifying acquisition and transmission of Enterococcus faecium using genomic surveillance.
Gouliouris, T; COLL, F; LUDDEN, C; Blane, B; Raven, KE; Naydenova, P; Crawley, C; Török, ME; Enoch, DA; Brown, NM; Harrison, EM; Parkhill, J; Peacock, SJ;
2020
Nature microbiology, (2020).6 1 10.1038/s41564-020-00806-7.
Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016.
Rahman, SI A; DYSON, ZA; Klemm, EJ; Khanam, F; HOLT, KE; Chowdhury, EK; Dougan, G; Qadri, F;
2020
PLOS NEGLECTED TROPICAL DISEASES, (2020).14 2 10.1371/journal.pntd.0008036.
Plasmodium falciparum Isolates Carrying pfk13 Polymorphisms Harbor the SVMNT Allele of pfcrt in Northwestern Indonesia.
Lubis, IN D; Wijaya, H; Lubis, M; Lubis, CP; BESHIR, KB; SUTHERLAND, CJ;
2020
Antimicrobial agents and chemotherapy, (2020).64 8 10.1128/AAC.02539-19.
Patients with positive malaria tests not given antimalarial medicines: under-prescription of artemisinin-based combination therapies amongst 106,106 patients with malaria in ACT Consortium studies in Africa.
WISEMAN, V; O'Boyle, S; Bruxvoort, KJ; GOODMAN, C; Clarke, S; Baptiste, L; Mbacham, W; Onwujekwe, O; Staedke, S; BURCHETT, H; Schellenberg, D; Nyomugyenyi, R; Whitty, CJ M; Ansah, E; Abdulla, A; Kachur, P; Reyburn, H; Hopkins, H;
2020
Lancet Global Health, (2020).18, 10.1186/s12916-019-1483-6.
Incidence and treatment costs of severe bacterial infections among people who inject heroin: A cohort study in South London, England.
Lewer, D; Hope, VD; HARRIS, M; Kelleher, M; Jewell, A; Pritchard, M; Strang, J; Morley, KI;
2020
DRUG AND ALCOHOL DEPENDENCE, (2020).212, 10.1016/j.drugalcdep.2020.108057.
The Plasmodium falciparum Artemisinin Susceptibility-Associated AP-2 Adaptin μ Subunit is Clathrin Independent and Essential for Schizont Maturation.
Henrici, R; Edwards, R; Zoltner, M; VAN SCHALKWYK, D; Hart, M; MOHRING, F; MOON, R; Nofal, S; Patel, A; Flueck, C; BAKER, D; Odom John, A; Field, M; Sutherland, C;
2020
mBio, (2020).11 1 10.1128/mBio.02918-19.