Publications

Population-based analysis of ocular Chlamydia trachomatis in trachoma-endemic West African communities identifies genomic markers of disease severity.

LAST, AR; PICKERING, H; ROBERTS, CH; COLL, F; PHELAN, J; BURR, SE; Cassama, E; Nabicassa, M; Seth-Smith, HM B; Hadfield, J; Cutcliffe, LT; Clarke, IN; MABEY, DC W; BAILEY, RL; CLARK, TG; THOMSON, NR; HOLLAND, MJ;

2018

Genome medicine, (2018).10 1 10.1186/s13073-018-0521-x.

Changes in H3K27ac following lipopolysaccharide stimulation of nasopharyngeal epithelial cells.

Borghini, L; HIBBERD, M; Davila, S;

2018

BMC genomics, (2018).19 1 10.1186/s12864-018-5295-4.

Induction of Human T-cell and Cytokine Responses Following Vaccination with a Novel Influenza Vaccine.

Skibinski, DA G; Jones, LA; Zhu, YO; Xue, LW; Au, B; Lee, B; Naim, AN M; Lee, A; Kaliaperumal, N; Low, JG H; Lee, LS; Poidinger, M; Saudan, P; Bachmann, M; Ooi, EE; Hanson, BJ; Novotny-Diermayr, V; Matter, A; Fairhurst, A-M; HIBBERD, ML; Connolly, JE;

2018

Scientific Reports, (2018).8 1 10.1038/s41598-018-36703-7.

Know Your Heart: Rationale, design and conduct of a cross-sectional study of cardiovascular structure, function and risk factors in 4500 men and women aged 35-69 years from two Russian cities, 2015-18.

COOK, S; Malyutina, S; Kudryavtsev, AV; Averina, M; BOBROVA, N; Boytsov, S; Brage, S; CLARK, TG; DIEZ BENAVENTE, E; Eggen, AE; Hopstock, LA; Hughes, A; Johansen, H; Kholmatova, K; Kichigina, A; Kontsevaya, A; Kornev, M; Leong, D; Magnus, P; Mathiesen, E; MCKEE, M; MORGAN, K; Nilssen, O; Plakhov, I; Quint, JK; ... LEON, DA.

2018

Wellcome Open Research, (2018).3, 10.12688/wellcomeopenres.14619.3.

A forward genetic screen reveals a primary role for Plasmodium falciparum Reticulocyte Binding Protein Homologue 2a and 2b in determining alternative erythrocyte invasion pathways.

CAMPINO, S; Marin-Menendez, A; Kemp, A; Cross, N; Drought, L; Otto, TD; Benavente, ED; Ravenhall, M; Schwach, F; Girling, G; Manske, M; Theron, M; Gould, K; Drury, E; CLARK, TG; Kwiatkowski, DP; Pance, A; Rayner, JC;

2018

PLoS pathogens, (2018).14 11 10.1371/journal.ppat.1007436.

Global genetic diversity of var2csa in Plasmodium falciparum with implications for malaria in pregnancy and vaccine development.

Benavente, ED; Oresegun, DR; De Sessions, PF; WALKER, EM; ROPER, C; Dombrowski, JG; De Souza, RM; Marinho, CR F; SUTHERLAND, CJ; HIBBERD, ML; Mohareb, F; BAKER, DA; CLARK, TG; CAMPINO, S;

2018

Scientific reports, (2018).8 1 10.1038/s41598-018-33767-3.

Understanding molecular consequences of putative drug resistant mutations in Mycobacterium tuberculosis.

Portelli, S; PHELAN, JE; Ascher, DB; CLARK, TG; FURNHAM, N;

2018

Scientific reports, (2018).8 1 10.1038/s41598-018-33370-6.

Global expansion of Mycobacterium tuberculosis lineage 4 shaped by colonial migration and local adaptation.

Brynildsrud, OB; Pepperell, CS; Suffys, P; Grandjean, L; Monteserin, J; Debech, N; Bohlin, J; Alfsnes, K; Pettersson, JO-H; Kirkeleite, I; Fandinho, F; Da Silva, MA; Perdigao, J; Portugal, I; Viveiros, M; CLARK, T; Caws, M; Dunstan, S; Thai, PV K; Lopez, B; Ritacco, V; Kitchen, A; Brown, TS; Van Soolingen, D; O'Neill, MB; ... Eldholm, V.

2018

SCIENCE ADVANCES, (2018).4 10 10.1126/sciadv.aat5869.

Using paired serology and surveillance data to quantify dengue transmission and control during a large outbreak in Fiji.

KUCHARSKI, AJ; Kama, M; Watson, CH; Aubry, M; FUNK, S; HENDERSON, AD; BRADY, OJ; Vanhomwegen, J; Manuguerra, J-C; Lau, CL; EDMUNDS, WJ; Aaskov, J; Nilles, EJ; Cao-Lormeau, V-M; Hué, S; HIBBERD, ML;

2018

eLife, (2018).7, 10.7554/eLife.34848.

Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data.

SOBKOWIAK, B; GLYNN, JR; HOUBEN, RM G J; Mallard, K; PHELAN, JE; Guerra-Assunção, JA; Banda, L; MZEMBE, T; Viveiros, M; McNerney, R; Parkhill, J; CRAMPIN, AC; CLARK, TG;

2018

BMC genomics, (2018).19 1 10.1186/s12864-018-4988-z.