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Publications

Data scientist analysing information

Browse a collection of academic publications and research papers, contributed to by personnel from the Unit.

Analysis of multivariate longitudinal immuno-epidemiological data using a pairwise joint modelling approach.
Lubyayi, L; Mawa, PA; COSE, S; ELLIOTT, AM; Levin, J; WEBB, EL;
2021
BMC immunology, (2021).22 1 10.1186/s12865-021-00453-5.
Evaluation of the performance of 25 SARS-CoV-2 serological rapid diagnostic tests using a reference panel of plasma specimens at the Uganda Virus Research Institute.
Lutalo, T; Nalumansi, A; Olara, D; Kayiwa, J; Ogwang, B; Odwilo, E; Watera, C; Balinandi, S; Kiconco, J; Nakaseegu, J; SERWANGA, J; Kikaire, B; SSEMWANGA, D; Abiko, B; Nsereko, C; COTTEN, M; Buule, J; Lutwama, J; Downing, R; KALEEBU, P;
2021
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, (2021).112, 10.1016/j.ijid.2021.09.020.
Contact tracing is an imperfect tool for controlling COVID-19 transmission and relies on population adherence.
Davis, EL; Lucas, TC D; Borlase, A; Pollington, TM; ABBOTT, S; Ayabina, D; Crellen, T; Hellewell, J; Pi, L; CMMID COVID-19 Working Group,; MEDLEY, GF; Hollingsworth, TD; KLEPAC, P;
2021
Nature communications, (2021).12 1 10.1038/s41467-021-25531-5.
Lessons learnt from the rapid implementation of reusable personal protective equipment for COVID-19 in Malawi.
Limani, F; Garley, D; Cocker, D; Patel, P; Patel, P; Gordon, S; NYIRENDA, M; Sakala, S; Gadama, LA; Dube, Q; Bodole, F; Mndolo, KS; Mponda, K; Freyne, B;
2021
BMJ global health, (2021).6 9 10.1136/bmjgh-2021-006498.
Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data.
MUNDAY, JD; JARVIS, CI; Gimma, A; Wong, KL M; VAN ZANDVOORT, K; CMMID COVID-19 Working Group,; FUNK, S; EDMUNDS, WJ;
2021
BMC medicine, (2021).19 1 10.1186/s12916-021-02107-0.
Patient and health provider costs of integrated HIV, diabetes and hypertension ambulatory health services in low-income settings - an empirical socio-economic cohort study in Tanzania and Uganda.
Shiri, T; BIRUNGI, J; Garrib, AV; Kivuyo, SL; Namakoola, I; Mghamba, J; Musinguzi, J; Kimaro, G; Mutungi, G; NYIRENDA, MJ; Okebe, J; Ramaiya, K; Bachmann, M; Sewankambo, NK; Mfinanga, S; Jaffar, S; Niessen, LW;
2021
BMC medicine, (2021).19 1 10.1186/s12916-021-02094-2.
The contribution of hospital-acquired infections to the COVID-19 epidemic in England in the first half of 2020.
Knight, GM; Pham, TM; Stimson, J; FUNK, S; Jafari, Y; Pople, D; Evans, S; Yin, M; Brown, CS; Bhattacharya, A; Hope, R; Semple, MG; ISARIC4C Investigators,; CMMID COVID-19 Working Group,; Read, JM; Cooper, BS; Robotham, JV;
2021
BMC Infectious Diseases, (2021).22 1 10.1186/s12879-022-07490-4.
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa.
Wilkinson, E; Giovanetti, M; Tegally, H; San, JE; Lessells, R; Cuadros, D; Martin, DP; Rasmussen, DA; Zekri, A-RN; Sangare, AK; Ouedraogo, A-S; SESAY, AK; Priscilla, A; Kemi, A-S; Olubusuyi, AM; Oluwapelumi, AO O; Hammami, A; Amuri, AA; Sayed, A; Ouma, AE O; Elargoubi, A; Ajayi, NA; Victoria, AF; Kazeem, A; George, A; ... De Oliveira, T.
2021
Science, (2021).374 6566 10.1126/science.abj4336.
Controlling diabetes and hypertension in sub-Saharan Africa: lessons from HIV programmes.
Jaffar, S; Ramaiya, K; Karekezi, C; Sewankambo, N; RESPOND-AFRICA Group,;
2021
Lancet, (2021).398 10306 10.1016/S0140-6736(21)01731-1.
The praziquantel in preschoolers (PIP) trial: study protocol for a phase II PK/PD-driven randomised controlled trial of praziquantel in children under 4 years of age.
WEBB, EL; EDIELU, A; Wu, HW; Kabatereine, NB; Tukahebwa, EM; Mubangizi, A; Adriko, M; ELLIOTT, AM; Hope, WW; Mawa, PA; Friedman, JF; BUSTINDUY, AL;
2021
Trials, (2021).22 1 10.1186/s13063-021-05558-1.