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Mr Jody Phelan

Assistant Professor

United Kingdom

Jump to: Affiliations Teaching Publications

Affiliations
Department of Infection Biology
Faculty of Infectious and Tropical Diseases

Centres

Antimicrobial Resistance Centre

Teaching

Help organise and teach on the Infectious Disease 'Omics short course at LSHTM and overseas. Teach on the pathogen genomics masters module.

Selected Publications
Mycobacterium tuberculosis whole genome sequencing provides insights into the Manila strain and drug-resistance mutations in the Philippines.
PHELAN, JE; Lim, DR; Mitarai, S; De Sessions, PF; Tujan, MA A; Reyes, LT; Medado, IA P; Palparan, AG; Naim, AN M; Jie, S; Segubre-Mercado, E; Simoes, B; CAMPINO, S; HAFALLA, JC; Murase, Y; Morishige, Y; HIBBERD, ML; Kato, S; Ama, MC G; CLARK, TG;
2019
Scientific reports
Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs.
PHELAN, JE; O'Sullivan, DM; Machado, D; Ramos, J; OPPONG, YE A; CAMPINO, S; O'Grady, J; McNerney, R; HIBBERD, ML; Viveiros, M; Huggett, JF; CLARK, TG;
2019
Genome medicine
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis.
COLL, F; PHELAN, J; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ali, S; Abdallah, AM; Alghamdi, S; Alsomali, M; Ahmed, AO; Portelli, S; OPPONG, Y; Alves, A; Bessa, TB; CAMPINO, S; Caws, M; Chatterjee, A; CRAMPIN, AC; DHEDA, K; FURNHAM, N; GLYNN, JR; Grandjean, L; Minh Ha, D; Hasan, R; Hasan, Z; ... CLARK, TG.
2018
Nature genetics
The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs.
PHELAN, J; O'Sullivan, DM; Machado, D; Ramos, J; Whale, AS; O'Grady, J; DHEDA, K; CAMPINO, S; McNerney, R; Viveiros, M; Huggett, JF; CLARK, TG;
2016
Genome medicine
Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance.
PHELAN, J; COLL, F; McNerney, R; Ascher, DB; Pires, DE V; FURNHAM, N; Coeck, N; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ramsay, A; CAMPINO, S; HIBBERD, ML; Pain, A; Rigouts, L; CLARK, TG;
2016
BMC medicine
Genome-wide association study of global Plasmodium vivax populations provides insights into the evolution of drug resistance
Ngwana-Joseph, G; PHELAN, J; Manko, E; Dombrowski, J; Santos, SD; Suarez-Mutis, M; Machado, RL; Marinho, C; Nolder, D; Nosten, F; SUTHERLAND, C; CAMPINO, S; CLARK, T;
2024
Research Square
hAMRonization: Enhancing antimicrobial resistance prediction using the PHA4GE AMR detection specification and tooling
Mendes, I; Griffiths, E; Manuele, A; Fornika, D; Tausch, S; Le-Viet, T; PHELAN, J; Meehan, C; Raphenya, A; Alcock, B; Culp, E; Lorenzo, F; Haim, MS; Witney, A; Black, A; Katz, L; Oluniyi, P; Olawoye, I; Timme, R; Neoh, H-M; Lam, SD; Jamaluddin, TZ M T; Nathan, S; Ang, MY; Di Gregorio, S; ... Maguire, F.
2024
bioRxiv
Multi-platform whole genome sequencing for tuberculosis clinical and surveillance applications.
Thorpe, J; Sawaengdee, W; Ward, D; Campos, M; Wichukchinda, N; Chaiyasirinroje, B; Thanraka, A; Chumpol, J; PHELAN, JE; CAMPINO, S; Mahasirimongkol, S; CLARK, TG;
2024
Scientific reports
Newly Identified Mycobacterium africanum Lineage 10, Central Africa.
Guyeux, C; Senelle, G; Le Meur, A; Supply, P; Gaudin, C; PHELAN, JE; CLARK, TG; Rigouts, L; De Jong, B; Sola, C; Refrégier, G;
2024
Emerging infectious diseases
New reference genomes to distinguish the sympatric malaria parasites, Plasmodium ovale curtisi and Plasmodium ovale wallikeri.
Higgins, M; Manko, E; Ward, D; PHELAN, JE; Nolder, D; SUTHERLAND, CJ; CLARK, TG; CAMPINO, S;
2024
Scientific reports
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Jody Phelan

Contact

United Kingdom